Synthesis, Crystal Structure and DNA-Binding Property of a New Cu(II) Complex Based on 4-(Trifluoro-methyl)nicotinic Acid

SHAN Feng-Lin, SONG Huan, GAO Xue-Zhi, LI Bing and MA Xiao-Xia*

Chin. J. Struct. Chem. 2022, 41, 2202057-2202063  DOI: 10.14102/j.cnki.0254-5861.2011-3257

February 15, 2022

4-(trifluoro-methyl) nicotinic acid, crystal structure, DNA

ABSTRACT

A new complex [Cu1.5(tfc)3(H2O)4]·3H2O (1, Htfc = 4-(trifluoro-methyl) nicotinic acid) has been synthesized and characterized by X-ray single-crystal diffraction, elemental analysis, IR spectra and thermo-gravimetric analysis. 1 belongs to orthorhombic system, space group Pccn with a = 44.507(2), b = 10.7710(6), c = 11.7544(7) Å, V = 5634.9(6) Å3, Z = 1, Dc = 1.803 mg·cm-3, F(000) = 3068, μ = 1.266 mm-1, the final R = 0.0488 and wR = 0.1103 with I > 2σ(I). The Cu(II) ion is coordinated by two N and two O atoms from different Htfc as well as two O atoms from two coordinated water molecules, forming a 0D motif with distorted octahedral geometry. The adjacent 0D units are linked into 2D structures through bridge connection coordination mode. In addition, the binding properties of the complex with CT-DNA were investigated by fluorescence and ultraviolet spectra. UV spectra indicate classical intercalation between the complex and CT-DNA. Moreover, the interactions between the ligand and the complex with CT-DNA were studied by EtBr fluorescence probe, which proved that these compounds bind to CT-DNA through an intercalation mode. The binding constants were 0.76 and 1.15 for Htfc and complex 1, which means 1 has stronger interaction with CT-DNA than Htfc.


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